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fastacmd.html
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<!--
/* $Id: fastacmd.html,v 0.1 2011/11/21 $
-->
<!-- A tool based in the NCBI wwwblast --->
<HTML>
<TITLE>FASTACMD Search </TITLE>
<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<map name=img_map>
<area shape=rect coords=2,1,48,21 href="http://www.ncbi.nlm.nih.gov">
<area shape=rect coords=419,1,459,21 href="index.html">
<area shape=rect coords=465,1,505,21 href="docs/fastacmd_help.html">
</map>
<img USEMAP=#img_map WIDTH=509 HEIGHT=22 SRC="images/fastacmd_form.gif" ISMAP>
<FORM ACTION="/blast/fastacmd.cgi" METHOD = "POST">
<BR>
<B>This is a web app. to retrieve sequences in fasta format from a blastdb<BR>
using fastacmd.</B>
<BR>
<BR>
<B>Choose database to search:</B>
<P>
<a href="docs/blast_databases.html">Database (-d)</a>
<select name = "DATALIB">
<option VALUE = "nr"> nr
<!-- Add here your blastdb as <option VALUE ="blastdbfile"> blastdbname --->
</select>
<P>
Enter sequence id or a search string below (-s):
<BR>
<input TYPE="text" NAME="ID" VALUE="" SIZE="64">
<BR>
<P>
Set subsequence (-L): From
 <input TYPE="text" NAME="QUERY_FROM" VALUE="" SIZE="10">
  To
<input TYPE="text" NAME="QUERY_TO" VALUE="" SIZE="10">
<P>
Select Strand (-S) (only for nucleotides):
<select name="STRAND">
<option VALUE = "+"> +
<option VALUE = "-"> -
</select>
<BR>
<INPUT TYPE="submit" VALUE="Submit">
<HR>
<BR>
<!-- Created: Thu Mar 16 16:41:05 EST 2000 -->
<!-- hhmts start -->
Created: Nov 18, 2011
<!-- hhmts end -->
</BODY>
</HTML>