random character on line 21 of plot.occurrence.threshold.R

[bi0m3trics]

Hey Jeff, looks like there's a random "b" on line 21 in plot.occurrence.threshold.R
https://github.com/jeffreyevans/rfUtilities/blob/master/R/plot.occurrence.threshold.R

[daviskec]

That random b seems to be preventing me from installing the development version of the packages on R 4.4.0.

See below error:

remotes::install_github("jeffreyevans/rfUtilities")
Downloading GitHub repo jeffreyevans/rfUtilities@HEAD
Running `R CMD build`...
* checking for file ‘/tmp/RtmpYZDbXI/remotes1e94245514714f/jeffreyevans-rfUtilities-a113e2c/DESCRIPTION’ ... OK
* preparing ‘rfUtilities’:
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘rfUtilities_2.2-0.tar.gz’
Installing package into ‘/cluster/medbow/home/kdavis79/R/x86_64-pc-linux-gnu-library/4.4’
(as ‘lib’ is unspecified)
Warning in strptime(xx, f, tz = tz) :
  unknown timezone 'America/New_York'
Warning in strptime(xx, f, tz = tz) : unknown timezone 'GMT'
Warning in strptime(xx, f, tz = tz) :
  unknown timezone 'America/New_York'
* installing *source* package ‘rfUtilities’ ...
** using staged installation
** R
Error in parse(...) : 
  /tmp/Rtmpxjlnl0/R.INSTALL3061913ee3680d/rfUtilities/R/plot.occurrence.threshold.R:21:10: unexpected symbol
20:        stop("Not a supported statistic")
21:      }   b
             ^
ERROR: unable to collate and parse R files for package ‘rfUtilities’
* removing ‘/cluster/medbow/home/kdavis79/R/x86_64-pc-linux-gnu-library/4.4/rfUtilities’
Warning message:
In i.p(...) :
  installation of package ‘/tmp/RtmpYZDbXI/file1e94243dc92828/rfUtilities_2.2-0.tar.gz’ had non-zero exit status

[jeffreyevans]

Katie, at this point the GitHub development version of rfUtilities is “under development”. Please install from the CRAN archive using the devtools package. devtools::install_version("rfUtilities", version="2.1-5") Best, Jeff Jeffrey S. Evans, Ph.D., | Senior Landscape Ecologist & Biometrician The Nature Conservancy | Global Protect, Science Visiting Professor | University of Wyoming | Ecosystem Sciences Laramie, WY | ***@***.******@***.***> | (970) 672-6766<tel:(970)%20672-6766> ORCID-ID 0000-0002-5533-7044 TNC Biography<https://www.nature.org/en-us/about-us/who-we-are/our-people/jeff-evans/> – Google Scholar<https://scholar.google.com/citations?user=FwU_ppgAAAAJ&hl=en> From: Katie Davis ***@***.***> Sent: Wednesday, October 9, 2024 1:42 PM To: jeffreyevans/rfUtilities ***@***.***> Cc: Subscribed ***@***.***> Subject: Re: [jeffreyevans/rfUtilities] random character on line 21 of plot.occurrence.threshold.R (Issue #12) That random b seems to be preventing me from installing the development version of the packages on R 4.4.0. See below error: remotes::install_github("jeffreyevans/rfUtilities") Downloading GitHub repo ***@***.*** Running `R CMD build`... * checking for file ‘/tmp/RtmpYZDbXI/remotes1e94245514714f/jeffreyevans-rfUtilities-a113e2c/DESCRIPTION’ ... OK * preparing ‘rfUtilities’: * checking DESCRIPTION meta-information ... OK * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories * building ‘rfUtilities_2.2-0.tar.gz’ Installing package into ‘/cluster/medbow/home/kdavis79/R/x86_64-pc-linux-gnu-library/4.4’ (as ‘lib’ is unspecified) Warning in strptime(xx, f, tz = tz) : unknown timezone 'America/New_York' Warning in strptime(xx, f, tz = tz) : unknown timezone 'GMT' Warning in strptime(xx, f, tz = tz) : unknown timezone 'America/New_York' * installing *source* package ‘rfUtilities’ ... ** using staged installation ** R Error in parse(...) : /tmp/Rtmpxjlnl0/R.INSTALL3061913ee3680d/rfUtilities/R/plot.occurrence.threshold.R:21:10: unexpected symbol 20: stop("Not a supported statistic") 21: } b ^ ERROR: unable to collate and parse R files for package ‘rfUtilities’ * removing ‘/cluster/medbow/home/kdavis79/R/x86_64-pc-linux-gnu-library/4.4/rfUtilities’ Warning message: In i.p(...) : installation of package ‘/tmp/RtmpYZDbXI/file1e94243dc92828/rfUtilities_2.2-0.tar.gz’ had non-zero exit status — Reply to this email directly, view it on GitHub<#12 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ACLKH74A4TV6T5WWZ6N2MU3Z2WBHNAVCNFSM6AAAAABPVH7VFKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDIMBTGI4TMMRQGA>. You are receiving this because you are subscribed to this thread.Message ID: ***@***.******@***.***>>

[daviskec]

Thanks, Jeff, that let me install the package!