*** ERROR: Couldn't find Rscript - is R installed? ***

[Rohit-Satyam]

I have R installed in /usr/bin/R however, when I run your tool I get the error

*** ERROR: Couldn't find Rscript - is R installed? ***

I think the issue is in this code block when checking R version. Running Rscript --version returns Rscript (R) version 4.3.1 (2023-06-16). Can you please fix this.

[richardmleggett]

Thanks for your report. If you're sure that Rscript is installed, it should be safe to remove that check you spotted in the code.

We'll add this to the "To do" list to sort out, but unfortunately, nanook has now lagged behind nanopore developments and really needs a complete rewrite.

NanoOK RT has been replaced completely by MARTi - https://marti.readthedocs.io/en/latest/