Skip to content

Releases: x-atlas-consortia/hs-ontology-api

v2.1.2

16 Aug 15:49
e61b83b
Compare
Choose a tag to compare
  • Add new endpoints of /dataset-types and /dataset-types/<name>
  • Replace some references to validate_application function in the ubkg-api with calls to the function in hs-ontology-api
  • Update to ubkg-api==2.1.7

Full Changelog: v2.1.1...v2.1.2

v2.1.1

06 Aug 01:51
a46e9f1
Compare
Choose a tag to compare

Update to use ubkg-api==2.1.6 for the Flask v3 updates and three new endpoints

Full Changelog: v2.1.0...v2.1.1

v2.1.0

01 Aug 16:22
b8aa504
Compare
Choose a tag to compare
  • New assayclass endpoints - routes, controllers, query code to support new assayclass model in UBKG.
  • Deprecation of datasets endpoint.
  • Refactored legacy assayname and assaytype endpoints to account for new assay class model.
  • Refactored field-assay endpoint to account for new assay class model.
  • Fixes to organs endpoints to account for updates to UBERON codes for organs like left eye, left knee, etc.
  • Updates to SmartAPI YAML
  • Use the ubkg-api 2.1.5 from PyPI

Full Changelog: v2.0.3...v2.1.0

v2.0.3

29 May 15:03
f97db23
Compare
Choose a tag to compare

Upgrade to use ubkg-api v2.1.4 to include the bug fixes to /sources endpoint

Full Changelog: v2.0.2...v2.0.3

v2.0.2

20 May 12:37
aaf35a3
Compare
Choose a tag to compare

Upgrade to use ubkg-api v2.1.3 to include the new endpoint /sources

Full Changelog: v2.0.2...v2.0.2

v2.0.1

08 May 15:19
0b083dd
Compare
Choose a tag to compare
  • Improvements to searching on starts_with parameter in genes-info etc.
  • Deprecate cells-api and add new config items

Full Changelog: v2.0.0...v2.0.1

v2.0.0

19 Apr 14:22
24a21ae
Compare
Choose a tag to compare
  • Use refactored new package of ubkg-api 2.1.1
  • Upgrade to use Python Neo4j driver v5 against the matching Neo4j v5 server
  • Add Github actions workflow for CI on Python dependency install
  • Increase to 4 workers and enable multi-threading for uWSGI deployment

Full Changelog: v1.4.11...v2.0.0

v1.4.11

21 Mar 14:59
50fdac2
Compare
Choose a tag to compare

Changes to field-* endpoints reflect new content from CEDAR, CEDAR_ENTITY

v1.4.10

12 Jan 15:59
4622be8
Compare
Choose a tag to compare

Add new endpoints with enhanced error messages

GET /field-descriptions
GET /field-descriptions/{name}
GET /field-types
GET /field-types/{name}
GET /field-entities
GET /field-entities/{name}
GET /field-assays
GET /field-assays/{name}
GET /field-schemas
GET /field-schemas/{name}
GET /field-types-info

v1.4.8

12 Dec 18:47
13cd6a1
Compare
Choose a tag to compare

Fix backward incompatibility issue for GET /assaytype resulting fields: vitessce_hints, contains_pii, vis_only will become vitessce-hints, contains-pii, vis-only.