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@Health-Informatics-UoN

University of Nottingham Health Informatics

University of Nottingham logo

University of Nottingham Centre for Health Informatics

We are transforming health research with cutting-edge digital technology and data science. Our work enables discoveries that improve people’s lives and enhance public health.

Tools

Carrot Logo

Carrot is an application stack for mapping and transforming health data to the OMOP common data model, in a secure way enabling collaboration and reusability.

Website

Carrot Mapper

Carrot Mapper is a tool for mapping health data to the OMOP common data model, in a secure way enabling collaboration and reusability.

MIT License Carrot Mapper Repo Carrot Mapper Releases Carrot Mapper Tests Python Carrot Mapper Containers Carrot Mapper Docs Carrot Mapper Roadmap

Carrot Transform

Carrot Transform is a tool for executing mappings to transform health data to the OMOP common data model.

MIT License Carrot Transform Repo Carrot Transform Releases Carrot Transform Tests Python Carrot Transform Docs Carrot Transform Roadmap


Hutch Logo

Hutch is part of an application stack for Federated Activities, such as Analytics, Data Discovery or Machine Learning.

Website

Bunny

A Cohort Discovery Task Resolver.

MIT License Bunny Repo Bunny Releases Bunny Tests Python Bunny Docker Images Bunny Docs Bunny Roadmap

Relay

A Federated Proxy for a Cohort Discovery Task API.

MIT License Relay Repo Relay Releases Relay Tests .NET Relay Docker Images Relay Docs Relay Roadmap

Hutch-TREFX

Hutch-TREFX is an Executing Agent implementation that accepts jobs from a TRE Agent, executes them and records outputs and provenance, submitting the results to be approved for egress.

MIT License Trefx Repo Trefx Releases Trefx Tests .NET Trefx Docs


Lettuce Logo

Lettuce uses an LLM for efficient translation and transformation into OMOP vocabulary.

Website

MIT License Lettuce Repo Lettuce Releases Python Lettuce Docs

Pinned Loading

  1. carrot-mapper carrot-mapper Public

    Streamlined Data Mapping to OMOP

    Python 14 5

  2. hutch-trefx hutch-trefx Public

    A TRE-FX Workflow Executor Agent for Federated Analytics

    C# 2

  3. lettuce lettuce Public

    Python 3

  4. hutch-cohort-discovery hutch-cohort-discovery Public archive

    Integrations, Tools, Workflows and RO-Crates for supporting Cohort Discovery.

    C# 2 1

Repositories

Showing 10 of 31 repositories
  • carrot-status Public

    Status page for Carrot Mapper webapp

    Health-Informatics-UoN/carrot-status’s past year of commit activity
    Markdown 0 MIT 0 0 0 Updated Feb 13, 2025
  • hutch-bunny Public

    A Cohort Discovery Task Resolver.

    Health-Informatics-UoN/hutch-bunny’s past year of commit activity
    Python 1 MIT 2 29 1 Updated Feb 12, 2025
  • query-builder Public

    A NextJS webapp to support SQL generation for Data Extractor

    Health-Informatics-UoN/query-builder’s past year of commit activity
    TypeScript 0 0 0 0 Updated Feb 12, 2025
  • lettuce Public
    Health-Informatics-UoN/lettuce’s past year of commit activity
    Python 3 MIT 0 19 1 Updated Feb 12, 2025
  • lettuce-inspector Public

    An evaluation for pipelines running Lettuce tasks

    Health-Informatics-UoN/lettuce-inspector’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 12, 2025
  • lettuce-hackathon-site Public

    A simple website for people interested in Lettuce for the HDR UK and ELIXIR UK hackathon

    Health-Informatics-UoN/lettuce-hackathon-site’s past year of commit activity
    0 0 0 0 Updated Feb 12, 2025
  • hutch-relay Public

    A Federated Proxy for Cohort Discovery Task API.

    Health-Informatics-UoN/hutch-relay’s past year of commit activity
    C# 0 MIT 0 21 0 Updated Feb 12, 2025
  • hutch-workflows Public Forked from HDRUK/rquest-omop-worker-workflows

    Source for workflow definitions for the open source RQuest OMOP Worker tool developed for Hutch/TRE-FX

    Health-Informatics-UoN/hutch-workflows’s past year of commit activity
    Common Workflow Language 0 MIT 1 0 0 Updated Feb 12, 2025
  • bacalhau-hack Public
    Health-Informatics-UoN/bacalhau-hack’s past year of commit activity
    MDX 0 MIT 0 0 0 Updated Feb 10, 2025
  • carrot-transform Public

    Streamlined Data Transformation to OMOP

    Health-Informatics-UoN/carrot-transform’s past year of commit activity
    Python 0 MIT 0 12 0 Updated Feb 10, 2025

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