-
Notifications
You must be signed in to change notification settings - Fork 11
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
OneOfPosition, how to point to the actual positions? #37
Comments
Hi @ljgarcia, Very good question. Right now as documented it would be Right now as documented it would be. <mything> faldo:location [
a faldo:OneOfPosition ;
faldo:location <option143> , <option144> .
]
<option143> a faldo:ExactPosition ;
faldo:position 143 ;
faldo:reference <mysequence> .
<option144> a faldo:ExactPosition ;
faldo:position 144 ;
faldo:reference <mysequence> . At somepoint I was thinking about . <mything> faldo:location [
a faldo:OneOfPosition ;
faldo:possiblePosition <option143> , <option144> .
] But this was not added to FALDO, now I am thinking should that be done afterall? |
Using faldo:possiblePosition seems easier and cleaner. What would be the way for this to make it to the ontology? Do you need a supporting use case? |
I think discussing a pull request with a fix of this of the tll on the mailing list will be best. |
It is currently not straight forward to model possible positions for OneOfPosition, see OBF#37. The new property possiblePositions makes it simpler. The second new property for FuzzyPosition, probability, cover cases as those of PTMs in IntAct where a probability is assigned to a fuzzy position.
@JervenBolleman please find a pull request in this regard, see #38 |
Hi all, @JervenBolleman Any news on PR #38? I saw on an email that faldo:possbilePosition would be ok but faldo:probablePossition maybe not too much. I am happy to modify the PR to get at least the possible position in place. Could you please comment on the PR what changes are needed in order to get this included in FALDO? Thanks, |
Hi all,
Let's suppose we have a site that has a location at either 143 or 144. I will link that site to a OneOfPosition element via faldo:location. Now, what would be the right predicate from the OneOfPosition element and the actual positions?
If my OneOfPosition is , I would have to do something like
- faldo:location - faldo:ExactPosition - faldo:Position - 143
- faldo:location - faldo:ExactPosition - faldo:Position - 144
Seems a bit long. Should not be easier having a predicate to directly link to OneOfPosition to the actual positions?
The text was updated successfully, but these errors were encountered: