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@bioinfomethods

MCRI Bioinfomethods Group

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  1. mitoreport mitoreport Public

    Interpretation software for mitochondrial variants

    Vue 3 1

  2. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 2 1

  3. seqr-loading-pipelines seqr-loading-pipelines Public

    Forked from ssadedin/hail-elasticsearch-pipelines

    hail-based pipelines for annotating variant callsets and exporting them to elasticsearch

    Python

  4. sandbox sandbox Public

    sandbox - play area

  5. warpy warpy Public

    Forked from ssadedin/warpy

    A port of the core elements of the nf-core/wf-human-variation nanopore pipeline to bpipe

    Shell 1

  6. Clair3 Clair3 Public

    Forked from HKU-BAL/Clair3

    Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

    Python

Repositories

Showing 10 of 12 repositories
  • warpy Public Forked from ssadedin/warpy

    A port of the core elements of the nf-core/wf-human-variation nanopore pipeline to bpipe

    bioinfomethods/warpy’s past year of commit activity
    Shell 0 MPL-2.0 2 1 0 Updated Feb 12, 2025
  • Jasmine Public Forked from mkirsche/Jasmine

    Jasmine: SV Merging Across Samples

    bioinfomethods/Jasmine’s past year of commit activity
    Java 0 MIT 19 0 0 Updated Feb 10, 2025
  • seqr-loading-pipelines Public Forked from ssadedin/hail-elasticsearch-pipelines

    hail-based pipelines for annotating variant callsets and exporting them to elasticsearch

    bioinfomethods/seqr-loading-pipelines’s past year of commit activity
    Python 0 MIT 20 0 0 Updated Feb 2, 2025
  • seqr Public Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    bioinfomethods/seqr’s past year of commit activity
    Python 2 AGPL-3.0 90 0 0 Updated Feb 2, 2025
  • panelapp Public
    bioinfomethods/panelapp’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jan 29, 2025
  • bioinfomethods/panelapp-infra’s past year of commit activity
    HCL 0 0 0 0 Updated Jan 21, 2025
  • StrVCTVRE Public Forked from andrewSharo/StrVCTVRE

    StrVCTVRE, a structural variant classifier for exonic deletions and duplications

    bioinfomethods/StrVCTVRE’s past year of commit activity
    Jupyter Notebook 0 MIT 6 0 0 Updated May 28, 2024
  • mitoreport Public

    Interpretation software for mitochondrial variants

    bioinfomethods/mitoreport’s past year of commit activity
    Vue 3 1 1 0 Updated May 22, 2024
  • tagmesh Public
    bioinfomethods/tagmesh’s past year of commit activity
    Vue 0 0 0 0 Updated May 21, 2024
  • docker-openresty Public Forked from openresty/docker-openresty

    Docker tooling for OpenResty

    bioinfomethods/docker-openresty’s past year of commit activity
    Dockerfile 0 BSD-2-Clause 533 0 0 Updated May 21, 2024

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