Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

v0.4.4 #76

Merged
merged 22 commits into from
Feb 5, 2025
Merged

v0.4.4 #76

merged 22 commits into from
Feb 5, 2025

Conversation

alxndrkalinin
Copy link
Collaborator

@alxndrkalinin alxndrkalinin commented Feb 3, 2025

  • generates random rank lists in index format instead of binary
  • refactors random_ap to calculate AP directly of indices of 1s
  • changes dtype for index-based ops to np.int32->np.uint32 for slightly better range (indices cannot be negative)
  • exposes # of threads for p-value calculation as a parameter
  • adds assign_reference_index function (closes Add function for creating reference index column #75)
  • adds new example notebook for null size selection

@alxndrkalinin alxndrkalinin changed the title V0.4.4 v0.4.4 Feb 3, 2025
@johnarevalo johnarevalo linked an issue Feb 5, 2025 that may be closed by this pull request
@johnarevalo johnarevalo merged commit b65bf1d into cytomining:main Feb 5, 2025
6 checks passed
src/copairs/map/map.py Outdated Show resolved Hide resolved
src/copairs/compute.py Outdated Show resolved Hide resolved
src/copairs/compute.py Outdated Show resolved Hide resolved
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Add function for creating reference index column Add docstrings
4 participants