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@epinowcast

Epinowcast

A community project building tools for real-time modelling of infectious disease

We are a community of infectious disease modellers, applied epidemiologists, software developers, and others building a suite of tools for real-time analysis of infectious diseases. On top of developing these tools, we also do research on when they work and when they don't, write case studies to showcase best practices, support users and decision-makers, and compare our work to that of others. Visit epinowcast.org for more.

Popular repositories Loading

  1. epinowcast epinowcast Public

    Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.

    R 61 21

  2. epidist epidist Public

    Estimate epidemiological delay distributions with brms

    R 14 5

  3. primarycensored primarycensored Public

    Primary event censored distributions.

    R 8 4

  4. baselinenowcast baselinenowcast Public

    In-development R package to nowcast right-truncated epidemiological data

    R 6

  5. coerceDT coerceDT Public

    Ingest-and-check user-provided input to standardized `data.table`s

    R 3

  6. actions actions Public

    GitHub Actions for the epinowcast community

    JavaScript 3

Repositories

Showing 10 of 12 repositories
  • baselinenowcast Public

    In-development R package to nowcast right-truncated epidemiological data

    epinowcast/baselinenowcast’s past year of commit activity
    R 6 0 11 2 Updated Feb 12, 2025
  • epidist Public

    Estimate epidemiological delay distributions with brms

    epinowcast/epidist’s past year of commit activity
    R 14 5 38 (1 issue needs help) 2 Updated Feb 12, 2025
  • primarycensored Public

    Primary event censored distributions.

    epinowcast/primarycensored’s past year of commit activity
    R 8 4 23 (4 issues need help) 0 Updated Feb 12, 2025
  • primarycensored-writeup Public

    A repository for writing up the primarycensored

    epinowcast/primarycensored-writeup’s past year of commit activity
    TeX 3 MIT 0 0 0 Updated Feb 12, 2025
  • actions Public

    GitHub Actions for the epinowcast community

    epinowcast/actions’s past year of commit activity
    JavaScript 3 MIT 0 2 2 Updated Feb 5, 2025
  • epinowcast.github.io Public

    Organisation website

    epinowcast/epinowcast.github.io’s past year of commit activity
    R 0 1 1 0 Updated Feb 4, 2025
  • epinowcast Public

    Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.

    epinowcast/epinowcast’s past year of commit activity
    R 61 21 102 (55 issues need help) 4 Updated Feb 3, 2025
  • coerceDT Public

    Ingest-and-check user-provided input to standardized `data.table`s

    epinowcast/coerceDT’s past year of commit activity
    R 3 0 5 1 Updated Jan 6, 2025
  • epinowcast.r-universe.dev Public

    Epinowcast R Universe

    epinowcast/epinowcast.r-universe.dev’s past year of commit activity
    0 0 0 0 Updated Oct 9, 2024
  • enwtheme Public
    epinowcast/enwtheme’s past year of commit activity
    0 1 0 0 Updated Sep 23, 2024

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