Fix unittest

galaxyproject · Jan 29, 2025 · 5d38284 · 5d38284
1 parent 3f01474
commit 5d38284
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Showing 4 changed files with 618 additions and 681 deletions.
diff --git a/.github/workflows/lint_and_unittest.yaml b/.github/workflows/lint_and_unittest.yaml
@@ -39,4 +39,5 @@ jobs:
         run: python -m pip install -r requirements.txt
       - name: Run unittests
         run: |
+          cd sources
           PYTHONPATH=bin python -m unittest discover -s bin/tests
diff --git a/sources/bin/extract_galaxy_workflows.py b/sources/bin/extract_galaxy_workflows.py
@@ -136,7 +136,8 @@ def add_projects(self, wf: dict) -> None:
                     f"https://{ self.source.lower() }.eu/projects/{project['id']}",
                     {"Accept": "application/json"},
                 )
-                self.projects.append(wfhub_project["data"]["attributes"]["title"])
+                if "attributes" in wfhub_project["data"] and "title" in wfhub_project["data"]["attributes"]:
+                    self.projects.append(wfhub_project["data"]["attributes"]["title"])
 
     def test_tags(self, tags: dict) -> bool:
         """
@@ -190,6 +191,7 @@ def add_workflows_from_workflowhub(self, prefix: str = "") -> None:
         )
         print(f"Workflows from WorkflowHub: {len(wfhub_wfs['data'])}")
         data = wfhub_wfs["data"]
+        print(data)
         if self.test:
             data = data[:10]
         for wf in data: