New Evaluating Reference Data for Bulk RNA Deconvolution tutorial #5549
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…m/hexhowells/training-material into deconvolution-evaluation-tutorial
topics/single-cell/tutorials/bulk-deconvolution-evaluate/tutorial.md
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Co-authored-by: Saskia Hiltemann <[email protected]>
| @@ -507,6 +507,10 @@ Camila-goclowski: | |||
| email: [email protected] | |||
| linkedin: camila-goclowski | |||
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| carloscheemendonca: | |||
| name: Carlos Chee Mendonça | |||
| joined: 2025-01 | |||
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@carloscheemendonca please feel free to edit or add more information about yourself to this entry as you see fit
…m/hexhowells/training-material into deconvolution-evaluation-tutorial
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the tests are still failing because the name of this file is expected to end in -test.yml, so just renaming like deconv-eval-stage-1-create-data-test.yml should fix that. And thanks for adding the testing!
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Ah yeah I renamed them before uploading and forgot to add that back in.
Also, the deconv-eval-stage-1-create-data_child workflow is a sub-workflow used in the deconv-eval-stage-1-create-data workflow. I'm not sure how I should add testing for that or if it's even needed here since I would guess it's part of the parent workflow?
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@hexhowells shouldn't be necessary for the subworkflow no
also, my bad, it should be -tests.yml (with the s)
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Thanks @hexhowells, looks good to me! Will leave it open in case you still want a review from a single-cell expert, but otherwise feel free to hit the merge button if you're also happy with it 👍 |
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@hexhowells or rather, let me know if it is ready from your side, then I will merge |
New tutorial on evaluating reference data for bulk RNA deconvolution tools, evaluating both MuSiC and NNLS deconvolution tools within Galaxy.