Ensure AGI_LocusCode IDs are compacted in oio:id values. #113
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
For #106. This is kind of a hack, but that fits the theme of
fix-obo-uris.pl
.AGI_LocusCode
IDs don't seem to be given theoboInOwl:id
compacted value by the OWL API parser, due to the underscore within the prefix.Alternatively we could use a different prefix for these identifiers, but I'm not sure of the origin of this particular prefix and who else uses it.
I believe that if the compacted form is in the ontology as an
oboInOwl:id
value, things should look correct in the Solr load.