Merge pull request #10 from ronin-gw/v0.3.1

V0.3.1
ronin-gw · Nov 2, 2019 · 70c32b6 · 70c32b6
2 parents ac1a41c + bb885e7
commit 70c32b6
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,5 +1,14 @@
 # Change Log
 
+## v0.3.1 (2019-11-01)
+**Implemented enhancements:**
+- Support VSN calculation
+- Save number of (mappable) reads as a file for replotting
+- Improve minimum coefficient obtaining method
+
+**Fixed bugs:**
+- Avoid arctanh divergence
+
 ## v0.3.0 (2019-07-03)
 - Drop python3.4 support
 **Implemented enhancements:**

diff --git a/PyMaSC/__init__.py b/PyMaSC/__init__.py
@@ -1,7 +1,8 @@
 import sys
 from functools import wraps
 
-VERSION = "0.3.0"
+VERSION = "0.3.1"
+WEBSITE_URL = "https://pymasc.sb.ecei.tohoku.ac.jp/"
 
 
 def logging_version(logger):

diff --git a/PyMaSC/handler/masc_noindex_worker.py b/PyMaSC/handler/masc_noindex_worker.py
@@ -76,7 +76,7 @@ def run(self):
 
         for read in self.align_file:
             chrom = read.reference_name
-            if chrom is None:
+            if chrom is None or chrom not in self.references:
                 continue
 
             if chrom != self._chr: