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Libpitt/606 grabbing activity props#619

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maxsibilla wants to merge 44 commits intomainsennetconsortium/entity-api:mainfrom libpitt/606-grabbing-activity-propssennetconsortium/entity-api:libpitt/606-grabbing-activity-propsCopy head branch name to clipboard

+629-625

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Commits on Feb 5, 2025

• Resolve for grabbing activity properties - #606

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• Eliminate use of get_activity_protocol - #606

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• Retrieve activity prop where applicable - #606

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• Check instance - #606

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Commits on Feb 6, 2025

• Update doc - #606

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• Add ability to parse json_string and list in neo4j with apoc.convert.* methods - #606

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• Replinish methods to original state 0314e0 and update doc strings - #606

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• Update doc string

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• Update documentation

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• Update doc

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• Check type

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• Fix key error

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• Add extra check because of cypher query mapping

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• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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Commits on Feb 7, 2025

• Add check

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• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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• Remove sensitive fields - #606

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• DRY things out

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• Add Numpydoc doc - #606

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Commits on Feb 10, 2025

• Dry code block - #606

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• Apply missing remove_unauthorized_fields_from_response to other endpoints - #606

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• Dry other endpoints - #606

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• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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• Fix access issue in /ancestors, remove unused variable - #606

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• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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Commits on Feb 11, 2025

• Change dict saving logic - #606 #621

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• Replace hubmap_commons.convert_str_literal with local get_as_dict and remove comments that no longer apply - #606 621

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• Fallback with convert_str_literal - #621

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• Fix tests

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• Fixing generated provenance graph for tests

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Commits on Feb 12, 2025

• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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• Using parameterized fields when creating entities

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• Adding special characters to tests

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• Merge pull request #623 from sennetconsortium/tjmadonna/parameterized_neo4j

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• Merge branch 'libpitt/606-grabbing-activity-props' of https://github.com/sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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• Add new variable to set if memcache should be used

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• Correcting memcache use logic

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• Adding same logic to check to use memcache for fetching, for storing

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• Use constant time access

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Commits on Feb 13, 2025

• Update documentation

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• Update doc

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• Merge branch 'libpitt/606-grabbing-activity-props' of github.com:sennetconsortium/entity-api into libpitt/606-grabbing-activity-props

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• Merge branch 'libpitt/606-grabbing-activity-props-key-collision' into libpitt/606-grabbing-activity-props

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• Simplify and speed up logic in get_dataset_organ_and_source_info trigger - #606

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