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Merge devel into master#427

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jeremyrcoyle merged 233 commits intomastertlverse/sl3:masterfrom develtlverse/sl3:develCopy head branch name to clipboardApr 29, 2024

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Commits on Sep 6, 2021

• Create Lrnr_glm_semiparametric

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• Update Lrnr_glm_semiparametric

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• Update Lrnr_glm_semiparametric

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• Update Lrnr_glm_semiparametric

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Commits on Sep 10, 2021

• Update Lrnr_glm_semiparametric

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Commits on Dec 23, 2021

• minor version bump for renewed devel

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• Remove extraneous spaces

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• Merge pull request #374 from MichaelChirico/patch-1

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• glmtree learner

  

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• Merge branch 'lrnr-glmtree' of github.com:tlverse/sl3 into lrnr-glmtree

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• update doc for lrnr glmtree

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• devtools::document changes

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• add partykit to suggests of description

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• describe process_formula in public

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• rm comments from learner template

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• add offset to args if in task

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• use call with args

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• check formula if specified by user

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• lrnr glmtree predict method

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• prediction task argument

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• import stats predict and rm more template comments

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• predict can be simplified to use defaults for lrnr-glmtree

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• lrnr glmtree tests, bypassing docall issue for offset

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• make site and style changes

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• fixed glmtree with offset

  

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• removed max depth default in glmtree

  

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• rm alpha argument in docs

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• rm alpha in docs and add error for user-specified formula with no offset

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• test formula offset error

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• news

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• make pr changes

  

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Commits on Jan 26, 2022

• Merge pull request #376 from tlverse/lrnr-glmtree

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• update docs and add weights for Lrnr_randomForest

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• make site changes

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• remotes to include new RF

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• remove erroneous space

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Commits on Feb 21, 2022

• return cv_sl_fit coefs

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• add names to dSL coefs

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• add names to nnls coefs

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• cv_risk option for revere and prettier print

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• make pr changes

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• fix nnls test

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• default NNLS metalearner

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• rm reliance on metalearner with eval_fun arg

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• use NLL for binary outcome

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• make pr changes

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• use metalearner eval_function if available

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• switch back to MSE for binary Y to correspond with default metalearner

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• Merge pull request #380 from tlverse/print

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• update news from today's PR

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• Merge branch 'devel' of github.com:tlverse/sl3 into devel

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Commits on Mar 1, 2022

• inner cv control

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• fix ellipses in initialize

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• Merge pull request #381 from tlverse/sl-folds

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Commits on Mar 4, 2022

• update docs; drop RF from remotes after CRAN update

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• update pkgdown

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• rm aux libs for slides

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• try fixing external folds

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Commits on Mar 5, 2022

• add test for inner cv and fix bracket

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• fix doc and cluster CV

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• make new task from cv_control folds and test cv_control

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• SL inner cv_control

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• add verbose arg for cv_control messages

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• make pr changes

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• Merge branch 'Larsvanderlaan-Lrnr_glm_semiparametric' of github.com:tlverse/sl3 into Larsvanderlaan-Lrnr_glm_semiparametric

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Commits on Mar 11, 2022

• update docs

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• rm learner no .R

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• Merge pull request #377 from tlverse/rf-weights-docs

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• Merge branch 'devel' of github.com:tlverse/sl3 into devel

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• Merge branch 'Larsvanderlaan-Lrnr_glm_semiparametric' of github.com:tlverse/sl3 into Larsvanderlaan-Lrnr_glm_semiparametric

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• CV_lrnr_sl to cv_sl

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• add test and fix examples

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• update docs

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• CV_lrnr_sl to cv_sl in test-sl

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Commits on Mar 12, 2022

• Merge pull request #382 from tlverse/cv-sl

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Commits on Mar 16, 2022

• solnp ellipses and control args

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• solnp ellipses and control args

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• make pr changes

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• solnp ellipses and control args

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• Update Lrnr_glm_semiparametric.R

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• generalize name test

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• restyle

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• Merge pull request #383 from tlverse/solnp-args

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• more flexible hal folds

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• Merge pull request #384 from tlverse/hal-folds

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Commits on Mar 25, 2022

• caret fix for binary and categorical outcomes

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• test caret for all supported outcome types

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• change confusing warning when outcome is character

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• pack categorical outcome predictions

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• Merge branch 'devel' of github.com:tlverse/sl3 into Larsvanderlaan-Lrnr_glm_semiparametric

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• Merge branch 'Larsvanderlaan-Lrnr_glm_semiparametric' of github.com:tlverse/sl3 into Larsvanderlaan-Lrnr_glm_semiparametric

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• test Lrnr_glm_semiparametric with CV

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• Lrnr_glm_semiparametric numeric predictions

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• update doc Lrnr_glm_semiparametric

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• update warning in tets

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Commits on Mar 27, 2022

• Merge pull request #357 from tlverse/Larsvanderlaan-Lrnr_glm_semiparametric

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• test caret pack predictions categorical outcome

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• make pr changes

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• Merge branch 'devel' of github.com:tlverse/sl3 into caret

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• make pr changes after merge

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Commits on Mar 30, 2022

• get_folds for tasks and learners with CV training

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• bump hal version for weights

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• change example due to caret bug for bartMachine method

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• algorithm to method in test

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• form

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• hi

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• Merge pull request #387 from tlverse/formulabugfix2

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• Merge branch 'devel' of github.com:tlverse/sl3 into caret

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• add formula fix to news

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• test formula with .

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• rm task formula creation

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Commits on Apr 6, 2022

• add comments throughout process_formula

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• bypass process_formula since formula is formal argument for learner

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• test learners that cansider learner param formula and process it

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• fix error related to invalvid column names and drop formula argument to bypass warning

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• drop formula argument to bypass warning

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• Merge pull request #385 from tlverse/caret

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• fix folds for metalearner

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• test cv selector changes

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• Merge pull request #388 from tlverse/discrete-sl-cvrisk

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• task doc and cv property

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Commits on May 22, 2022

• update default metalearner doc

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• try to fix failing test

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• Merge pull request #389 from tlverse/task-doc

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• allow null outcome

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• add rpart.control formals

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• get outcome type from training task

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• rm warning

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• make pr

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• Merge pull request #390 from tlverse/task-outcome

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• polspline categorical outcome

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• document data preprocessing

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• allow regression trees with binary outcome

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Commits on Jun 1, 2022

• fix process missing test to reflect changes

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• fix tests that brake with R4.2

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Commits on Jun 2, 2022

• fix process data params

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• Merge pull request #391 from tlverse/process-rpart-polspline

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• update news with recent PRs

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• require R 4.2

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• Update Lrnr_cv_selector.R

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Commits on Jun 5, 2022

• CATE learner based on GRF

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• test CATE learner

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• grfcate bypasses formula param

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• fix LOOCV test with Lrnr_grfcate

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• Merge pull request #393 from tlverse/grfcate

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Commits on Dec 7, 2022

• fix example lrnr-cv-selector

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• outcome_type flexibility and error handling

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