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Pull requests: nf-core/modules

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Pull requests list

fix tiny thing
#7455 opened Feb 7, 2025 by luisas Loading…
1 task done
Add sylphtax taxprof module
#7452 opened Feb 7, 2025 by sofstam Loading…
8 of 17 tasks
fix(gprofiler2_gost): define the database archive for reproducibility
#7450 opened Feb 7, 2025 by suzannejin Loading…
17 tasks
Rattle cluster
#7447 opened Feb 6, 2025 by chriswyatt1 Loading…
1
Update KRAKEN2/ADD to allow proper resuming
#7445 opened Feb 6, 2025 by jfy133 Loading…
17 tasks
New module: SKA/DISTANCE
#7437 opened Feb 5, 2025 by itrujnara Loading…
12 of 14 tasks
17
Add emu module with nf-test
#7434 opened Feb 5, 2025 by sofstam Loading…
8 of 17 tasks
1
13
New samtools/bgzip module to produce BGZF-compressed files.
#7433 opened Feb 5, 2025 by charles-plessy • Draft
17 tasks done
2
[DO NOT MERGE] Test PR to see how the template would look like when creating a new modules
#7430 opened Feb 4, 2025 by mirpedrol Loading…
7
Move output format information to the first queue channel of last/mafconvert
#7428 opened Feb 4, 2025 by charles-plessy Loading…
17 tasks done
add crabs/downloadtaxonomy as module
#7423 opened Feb 3, 2025 by famosab Loading…
17 tasks
Update biocontainers/cooler Docker tag to v0.10.3
#7419 opened Feb 1, 2025 by renovate bot Loading…
2 tasks
Update biocontainers/cnvkit Docker tag to v0.9.12
#7418 opened Feb 1, 2025 by renovate bot Loading…
2 tasks
Update dotnet monorepo
#7417 opened Feb 1, 2025 by renovate bot Loading…
2 tasks
@maxulysse @edmundmiller
add another clean-up step to GHA
#7416 opened Jan 31, 2025 by mirpedrol Loading…
1
run GHA on self-hosted runners by default or github after 2 retries
#7415 opened Jan 31, 2025 by mirpedrol Loading…
Update diff subworkflows
#7414 opened Jan 31, 2025 by suzannejin Loading…
17 tasks
11
don't run nf-test if only meta.yml was changed
#7406 opened Jan 31, 2025 by mashehu Loading…
Add db to output meta object for diamond/blastp
#7403 opened Jan 30, 2025 by erikrikarddaniel Loading…
2 of 17 tasks
5
Hifiadapterfilt
#7398 opened Jan 30, 2025 by Ge94 Loading…
14 of 17 tasks
1
3
Fix falco sample names
#7394 opened Jan 30, 2025 by MartinGrignard Loading…
1
should emit either tbi or csi
#7386 opened Jan 28, 2025 by tkchafin Loading…
17 tasks
1
index should be emitted as either tbi or csi
#7385 opened Jan 28, 2025 by tkchafin Loading…
17 tasks
1
Added nf-test for somalier/ancestry
#7380 opened Jan 27, 2025 by GallVp Loading…
4
Bump openms version to 3.3.0
#7373 opened Jan 27, 2025 by jonasscheid Loading…
11 of 17 tasks
2
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